Function to plot partial dependence plots with bootstrap uncertainties

Function to plot partial dependence plots with bootstrap uncertainties

Usage

plotPD(
  dw_model,
  variable = "all",
  intervals = 40,
  ylim = NULL,
  ylab = NULL,
  col = "tomato",
  nrow = NULL,
  polar.wd = FALSE,
  auto.text = TRUE,
  plot = TRUE
)

Arguments

dw_model

Model object from running buildMod().

variable

The variable(s) to plot. Defaults to "all", which plots all variables.

intervals

Number of intervals to to calculate partial dependence over.

ylim

user-specified ylim.

ylab

y-axis label. By default this is the pollutant name.

col

Colour for the panels. Passed to openair::openColours().

nrow

Number of rows for the plots.

polar.wd

Plot the any wind direction components, labelled "wd", on a polar axis? Defaults to FALSE.

auto.text

Either TRUE (default) or FALSE. If TRUE titles and axis labels will automatically try and format pollutant names and units properly, e.g., by subscripting the "2" in "NO2".

plot

Should a plot be produced? FALSE can be useful when analysing data to extract plot components and plotting them in other ways.

Value

Invisibly returns a list containing the plot, plot, a list of individual plots, panels, and a list of the data used to create them, data. plot is a patchwork object, so can be further manipulated using & and ggplot2.

See also

Other deweather model plotting functions: plot2Way(), plotInfluence()

Author

David Carslaw